TAP HMG in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

HMG_box
ARID
YABBY

(Domain names are clickable)



List of proteins (10)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0086s0060.1.ppacid=28918460 transcript=Cagra.0086s0060.1 locus=Cagra.0086s0060 ID=Cagra.0086s0060.1.v1.1 annot-version=v1.1
Cagra.0535s0005.1.ppacid=28913816 transcript=Cagra.0535s0005.1 locus=Cagra.0535s0005 ID=Cagra.0535s0005.1.v1.1 annot-version=v1.1
Cagra.1043s0022.1.ppacid=28897711 transcript=Cagra.1043s0022.1 locus=Cagra.1043s0022 ID=Cagra.1043s0022.1.v1.1 annot-version=v1.1
Cagra.1226s0043.1.ppacid=28916516 transcript=Cagra.1226s0043.1 locus=Cagra.1226s0043 ID=Cagra.1226s0043.1.v1.1 annot-version=v1.1
Cagra.1891s0017.1.ppacid=28900499 transcript=Cagra.1891s0017.1 locus=Cagra.1891s0017 ID=Cagra.1891s0017.1.v1.1 annot-version=v1.1
Cagra.2350s0098.1.ppacid=28908762 transcript=Cagra.2350s0098.1 locus=Cagra.2350s0098 ID=Cagra.2350s0098.1.v1.1 annot-version=v1.1
Cagra.3839s0003.1.ppacid=28909437 transcript=Cagra.3839s0003.1 locus=Cagra.3839s0003 ID=Cagra.3839s0003.1.v1.1 annot-version=v1.1
Cagra.6160s0027.1.ppacid=28912751 transcript=Cagra.6160s0027.1 locus=Cagra.6160s0027 ID=Cagra.6160s0027.1.v1.1 annot-version=v1.1
Cagra.6160s0028.1.ppacid=28912716 transcript=Cagra.6160s0028.1 locus=Cagra.6160s0028 ID=Cagra.6160s0028.1.v1.1 annot-version=v1.1
Cagra.7352s0006.1.ppacid=28911131 transcript=Cagra.7352s0006.1 locus=Cagra.7352s0006 ID=Cagra.7352s0006.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum